InformationPhenotype ID: 224Date Created: Wednesday, August 20, 2014Status: FinalDo Not List on the Collaboration Phenotypes List Contact informationAuthors: CHOP Phenotyping groupInstitution: CHOPNetwork Associations: eMERGEView Phenotyping Groups: eMERGE CHOP GroupeMERGE Phenotype WGOwner Phenotyping Groups: eMERGE CHOP Group Structured data: CPTICD9Data Source/clinical domain: observationsmedicationsDemographicsGender: FemaleMaleAge: PediatricAdultGeriatricRace: Black (African American, West African, Ethiopian, etc.)Caucasian (European)Caucasian (North African, Middle East, Other)East Asian (Mongol, Tibetan, Korean, Japanese, Thai, etc.)Mixed RaceNative AmericanOther RacePacific Islander (Polynesian, Micronesian, Hawaiian, etc.) Files: GERD phenotype algorithm.docx GERD chart review form.docx GERD Data Dictionary.xlsxlegacyEthnicity: HispanicNon-hispanicPhenotype Attributes: CPT CodesICD 9 CodesLaboratoriesMedicationsType of Phenotype: Disease or Syndrome People Watching For Updates: Jacqueline Kirby Jen Pacheco Jyoti Pathak Jane Grafton John Connolly Frank Mentch Lyam Vazquez David Cronkite Kathryn Jackson Vivian Gainer Barbara Benoit Suggested Citation CHOP Phenotyping group. CHOP. Gastroesophageal Reflux Disease (GERD) Phenotype Algorithm. PheKB; 2014 Available from: https://phekb.org/phenotype/224
Kathryn Jackson DD: Surgeries vs. Procedures Fri, 2014-10-24 15:55 Hello, Would it be possible to get definiton of which CPTs are procedures and which CPTs are surgeries? The CPT tab does not distinguish between the two, yet the types need to be sent in separate files. Thanks! -Katie
John Connolly Procedures/Surgeries Tue, 2014-10-28 11:36 Thanks Katie - good point. Realistically, there is no real need to require separate files - fine to send them combined. Cheers, John (CHOP)
David Cronkite DD: Medication Info Wed, 2014-11-12 16:30 I'm unclear about a couple of the hx_of_gerd_meds table: 1. drug_name: Is this the generic name of the drug? 2. drug_code: Is this the RxCui value? NDC? I also noticed that in the hx_of_gerd table, there's a ADHD_ICD9 variable. Was this intended to be GERD_ICD9? Thanks,David
John Connolly David Cronkite Comments Mon, 2014-11-17 14:01 For the drug_name we prefer the generic name (as suggested in the comment) and for drug_code, the rxcui of the generic if available. The ADHD_ICD9 variable is a typo that we corrected, but it looks like a version without the correction snuck into PheKB. Please ignore. Thanks, John
Kathryn Jackson
DD: Surgeries vs. Procedures
Fri, 2014-10-24 15:55Hello,
Would it be possible to get definiton of which CPTs are procedures and which CPTs are surgeries? The CPT tab does not distinguish between the two, yet the types need to be sent in separate files.
Thanks!
-Katie
John Connolly
Procedures/Surgeries
Tue, 2014-10-28 11:36Thanks Katie - good point. Realistically, there is no real need to require separate files - fine to send them combined.
Cheers,
John (CHOP)
Kathryn Jackson
Perfect, thank you!
Tue, 2014-10-28 18:30Perfect, thank you!
David Cronkite
DD: Medication Info
Wed, 2014-11-12 16:30I'm unclear about a couple of the hx_of_gerd_meds table:
1. drug_name: Is this the generic name of the drug?
2. drug_code: Is this the RxCui value? NDC?
I also noticed that in the hx_of_gerd table, there's a ADHD_ICD9 variable. Was this intended to be GERD_ICD9?
Thanks,
David
John Connolly
David Cronkite Comments
Mon, 2014-11-17 14:01For the drug_name we prefer the generic name (as suggested in the comment) and for drug_code, the rxcui of the generic if available.
The ADHD_ICD9 variable is a typo that we corrected, but it looks like a version without the correction snuck into PheKB. Please ignore.
Thanks,
John